Creates birth transition plots.
Usage
plot_birth_ogive(
fit,
data = NULL,
length_col = "length",
status_col = "status",
length_range = NULL,
n_points = 500,
show_data = TRUE,
show_rug = TRUE,
show_b50_line = TRUE,
color = NULL,
ribbon_alpha = 0.25,
x_lab = "Length (cm)",
y_lab = "Probability of Free-Swimming",
title = NULL,
base_size = 12,
theme_args = list(),
additional_layers = list()
)Arguments
- fit
A CmdStanMCMC object from
fit_bayesian_birth.- data
Optional data.table/data.frame with observed data.
- length_col
Character. Column name for length.
- status_col
Character. Column name for birth status.
- length_range
Numeric vector of length 2.
- n_points
Integer. Number of points. Default 500.
- show_data
Logical. Show data? Default
TRUE.- show_rug
Logical. Show rug? Default
TRUE.- show_b50_line
Logical. Show b50 line? Default
TRUE.- color
Character. Line color. Default uses primary vitalBayes magenta.
- ribbon_alpha
Numeric. Ribbon transparency.
- x_lab, y_lab
Character. Axis labels.
- title
Character. Plot title.
- base_size
Numeric. Base font size.
- theme_args, additional_layers
Lists for customization.